junco 0.1.6
CRAN release: 2026-05-10
Fixed
- Fixed
s_kaplan_meier()range censoring indicator handling to no longer produceNAvalues in the output when either all subjects are censored or none are censored. - Aligned
a_freq_resp_var_j()witha_freq_j()by adding.formatsandna_strparameters to allow user customization of output formatting and NA string representation (#67). - Fixed the hanging indent in the first column of the body of the table (#138)
- Export
leftside(),postfun_eq5dac_blank_lineandtt_to_tblfile - Minor bugfix in DOCX exporter when calculating the number of pages (#188)
- Fixed
tt_to_flextable_j()to have correct left-indentation in header col 1 (#171) and footer first line starting with newline (#171) - Fixed relative risk difference derivations for combined column facets in
a_freq_j(),a_freq_resp_var_j()anda_eair100_j()(#195) - Fixed calculation of ‘reduce_first_col_indentation’ and section break positions in
insert_keepNext_vertical_pagination()(#218) - Fixed the little gaps in neighboring spanning headers in the docx exporter (#216)
- Fixed blank pages happening at the end of the docx (#177)
- DOCX exporter fixed watermark location in case of listings
- DOCX exporter updated table border width from 0.75 to 0.875 inches
- DOCX exporter when having vertical pagination in tables or listings, fixed the rows misalignment from page 2 and below compared to RTF
- Fixed bug in
s_summarize_desc_j()when applied to almost constant data due to behavior fromt.test.default()(#257) -
tt_to_tlgrtf()now is passing vectorized colwidths when exporting ‘allparts’ to match the colwidths of the individual parts (#225)
Changed
- Moved
safe_t_test()froma_summarize_aval_chg_diff.Rto a new filesafe_t_test.R, - Moved
add_blank_line_rcells()froms_functions.Rtoblank_line.R. - changed return value
nfors_ancova_jinton_fit, to differentiate between these two statistics for combined functions_summarize_ancova_j()(#117) - added default label for median_range “Median (min, max)” in
junco_default_labels_start - changed label from “experimental” to “stable” for
default_stats_formats_labels - refactored functions
tt_to_flextable_j()andexport_as_docx_j() - created generic wrapper function
export_TLG_as_docx(), which now callsexport_as_docx_j()andexport_graph_as_docx()(#173) - Functions
export_as_docx_j()andexport_graph_as_docx()still exist but are now internal, i.e. not exported - updated vignette to explain correctly how to insert newlines in the headers of Tables and Listings (#179)
- “watermark” argument in the docx exporter is now a String instead of a Boolean (#181)
- faster docx unit tests (#197)
- LS means tabulation uses very slightly updated column header (no blanks around the hyphen in “Testing-Reference”)
- Bump flextable and remove the skip() units tests (#193)
- Update colwidths tests to derive values
- Fix old TODOs in tests
- docx exporter added missing defaults (#186)
- Changed all snapshot tests to
cran = TRUE - Footnotes in docx and RTF outputs are now 1 table row/cell (#285)
- removed label “experimental” for
theme_docx_default_j,tt_to_flextable_jandexport_TLG_as_docx
Added
- Added multi-comparator functionality (#271)
- Hotfix: Added several new functions for creating the Vital Sign tables for core and clinpharm:
a_summary_diff_mvars(),a_summary_j(),c_summary_subset_label(),filter_df_prior_afun(),prepend_label_cell(),s_diff_mean_ci(),s_summary_diff(),safe_t_test()(#304). - Added option to perform
a_summarize_ancova_jin a layout with a combined column facet (#117) + slight change in return value fors_ancova_j(), now we have n_fit instead of n returned - Added option to switch on/off the export of the csv in both
tt_to_tlgrtf()andexport_as_docx_j() - Added option to specify the output folder for the csv
- Added argument ‘validate’ to
export_TLG_as_docx()andtt_to_flextable_j()(#213) - Added “watermark” argument in the docx exporter for Figures (#181)
- Added argument
mult_adj_emmeansinfit_mmrm_j()to enable (single-step or step-down) Dunnett multiplicity adjustment for LS means contrasts (p-values and confidence intervals) for more than one experimental arm within visits. - Added option for subgroup variable in the
varsargument offit_mmrm_j()to enable fitting an overall MMRM with subgroup interaction terms. - Export helpers for LS means tabulation:
lsmeans_wide_cfun,lsmeans_wide_first_split_fun_fct,lsmeans_wide_second_split_fun_fct - Added
lifecycleto suggests
0.1.5 - 2026-03-03 (minor hotfix release)
Added and Removed
- Added new behavior for nested
countsourcein h_a_freq_dataprepaltdf_subset(#200)
0.1.4 - 2026-02-02 (minor hotfix release)
Fixed
- “caption” paragraph style in the docx exporter is now handled by flextable (#182)
- Fixed
tt_to_tlgrtf(), when exporting an empty listing do not lose Title and Footers - Fixed
tt_to_tlgrtf()argumentlabel_width_inswhich was not applying the change in the row label column width (#166).
0.1.3 - 2026-01-12 (minor hotfix release)
0.1.2 - 2025-12-10
Added and Removed
Add
a_two_tier()analysis functionAdd
a_maxlev()to be able to calculate count and percentage of the maximum level of an ordered factor per subjectRemove
brackets_to_rtf()Export
rbmi_pool()#22Add functionality to
a_freq_j()to processval = NULLfrom levels specified inlabel_map, as well as the modified versiona_freq_j_with_exclude()that allows to exclude the analysis from specified row splits. #95Add
a_cmhrms_j()to support p-value from CMH row mean score test, as well as the modified versiona_cmhrms_j_with_exclude()that allows to exclude the analysis from specified row splits. #97Added standard error (SE) column for each treatment arm’s least square (LS) means estimate to the
summarize_lsmeans_wide()layout.Added the internal function
do_exclude_split()to facilitate the exclusion of specified row splits from analysis functions.Remove some unused functions (jj_uc_map, postfun_cog, column_N, non_blank_sentinel, null_fn, unicodify
Add extra check for existence of
.alt_df_fullwhen layout has risk difference column and a row-split (h_create_alt_df) #120.Add docx exporter for Tables, Listings and Figures.
Add
alignmentsargument intt_to_tlgrtf()Removed
s_test_proportion_diff()and corresponding helper functions, as they are now available as needed in theternpackage.Added
cmh_satoandcmh_mn(Cochran-Mantel-Haenszel stratified proportion difference estimation with Sato variance and Miettinen Nurminen method, respectively)methodoptions to thes_proportion_diff_j()function.Added formatting function round type (#76)
Fixed bug in s_summarize_desc_j function to handle sparse data (zero variance) cases (#78)
0.1.1 - 2025-07-28
Added
- First release of the junco package for Table and Listing (TL) Reporting
- Functions to produce tables and listings in R
- Built on the rtables package framework
- Integration with formatters, rtables, tidytlg, and tern packages
Changed
- Initial CRAN release
All notable changes to this project will be documented in this file.
The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.
